DEMO COURSE WEBSITE

Biological & Physical Oceanography

Advanced topics from phytoplankton to fisheries, with emphasis on physical processes and their ecological implications.

Course Schedule
Week 13 · Lecture

Phytoplankton Identification and Domoic Acid Monitoring

Simplified Week 13: reference image, field guide, and Santa Cruz Wharf domoic acid timeseries.

Phytoplankton & the Tree of Life

Lecture visual
Phytoplankton phylogeny with captions
HAB food web diagram HAB distribution across US coasts

Plankton ID Activity & Field Guide

Lecture 13 section

For each species below, observe the illustration and microscope image, then identify the phytoplankton group and key morphological features.

Cyanobacteria
Dolichospermum illustration Dolichospermum microscope
Dolichospermum spp.
Filamentous chains; cylindrical/barrel cells; heterocysts for N₂ fixation; freshwater cyanotoxins
Coccolithophore
Emiliania huxleyi illustration Emiliania huxleyi microscope
Emiliania huxleyi
Spherical; calcium carbonate coccolith plates; no HAB; abundant in CCE
Diatom
Pseudo-nitzschia illustration Pseudo-nitzschia microscope
Pseudo-nitzschia spp.
Elongate fusiform; silica frustule; chains; ~½ species produce domoic acid (ASP)
Diatom
Chaetoceros illustration Chaetoceros microscope
Chaetoceros spp.
Rectangular cells; long corner setae; coiled/curved chains; no HAB; abundant in CCE
Dinoflagellate
Dinophysis illustration Dinophysis microscope
Dinophysis spp.
Armored; laterally flattened; large hypotheca (~¾); girdle lists; okadaic acid (DSP)
Dinoflagellate
Karenia brevis illustration Karenia brevis microscope
Karenia brevis
Unarmored; apical groove; dorsoventrally flattened; brevetoxins (NSP); Florida red tide
Dinoflagellate
Margalefidinium illustration Margalefidinium microscope
Margalefidinium spp.
Unarmored; cingulum rotates >1.5×; reactive oxygen species; fish kills / brown tide
Dinoflagellate
Tripos illustration Tripos microscope
Tripos spp.
Heavily thecate; 1–4 apical/antapical horns; no HAB; common in CCE
Dinoflagellate
Gambierdiscus illustration Gambierdiscus microscope
Gambierdiscus spp.
Lens-shaped; anterio-posteriorly compressed; thecate; ciguatoxins (CFP); tropical reefs
Dinoflagellate
Alexandrium catenella illustration Alexandrium catenella microscope
Alexandrium catenella
Armored; spherical; chains; saxitoxins (PSP); abundant in CCE

Click any species card to see full field guide details.

Santa Cruz Wharf — Pseudo-nitzschia & Domoic Acid Timeseries

Interactive